BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026G12SP1|AL428617
(839 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1756 1647 0.0
>3x_Contig1756
Length = 16846
Score = 1647 bits (829), Expect = 0.0
Identities = 835/839 (99%)
Strand = Plus / Minus
Query: 1 atggccgatacagaaagaaagatctctcattctaaatcttgccgtcatatacatccaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13538 atggccgatacagaaagaaagatctctcattctaaatcttgccgtcatatacatccaaga 13479
Query: 61 tccatccacaatctctgaatccctcagtacgttgagctggtcccattactggatcatcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13478 tccatccacaatctctgaatccctcagtacgttgagctggtcccattactggatcatcat 13419
Query: 121 aaatctctaccagtgttggatcatgtgttgctggctttgagatgcaaattacctgaccgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13418 aaatctctaccagtgttggatcatgtgttgctggctttgagatgcaaattacctgaccgt 13359
Query: 181 tgggtagattgcatttcaattgtgaattagggaacggacacgcacaatccgacttctgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13358 tgggtagattgcatttcaattgtgaattagggaacggacacgcacaatccgacttctgtc 13299
Query: 241 tcacacaatccaatgtctgtggacataaatwatgcggacagtcattatctaggaacattt 300
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 13298 tcacacaatccaatgtctgtggacataaataatgcggacagtcattatctaggaacattt 13239
Query: 301 gctggtaagagccaacatcccgctgttgctgctgttgctgctgttgctgtctattctggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13238 gctggtaagagccaacatcccgctgttgctgctgttgctgctgttgctgtctattctggt 13179
Query: 361 gacctgaatcgaaaaagaatccagacacagcttgtaaaaagaatgctgaaccaattattg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13178 gacctgaatcgaaaaagaatccagacacagcttgtaaaaagaatgctgaaccaattattg 13119
Query: 421 ttcccagtagtttcatagtaagttaagatcttcgtatttcgtaatactgcaatatgaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13118 ttcccagtagtttcatagtaagttaagatcttcgtatttcgtaatactgcaatatgaaat 13059
Query: 481 atcagatagcagtgtttagtacctatagtcttgtaaatcttggcatctcttcgaatattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13058 atcagatagcagtgtttagtacctatagtcttgtaaatcttggcatctcttcgaatattt 12999
Query: 541 cgaatatttcgcatgtatgccatttatgacaagtaatcgattttccaaaaatctttaaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12998 cgaatatttcgcatgtatgccatttatgacaagtaatcgattttccaaaaatctttaaac 12939
Query: 601 gtgtaagtattccaaaccaatattttwwagaaatttatgttaatacatgagatgactagc 660
|||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 12938 gtgtaagtattccaaaccaatattttaaagaaatttatgtaaatacatgagatgactagc 12879
Query: 661 tcacgagggaaaagagactgcaaacaaaaccactgcaggccatcaaagtgccaggtagag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12878 tcacgagggaaaagagactgcaaacaaaaccactgcaggccatcaaagtgccaggtagag 12819
Query: 721 gatgtatattggcattgctgaatttgtgggtgcttatgataaaattcttcaccgatgcag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12818 gatgtatattggcattgctgaatttgtgggtgcttatgataaaattcttcaccgatgcag 12759
Query: 781 ttctcattcttcatgtcagttggtgatttttgtttcgtgtttaaacattgacgcgttat 839
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12758 ttctcattcttcatgtcagttggtgatttttgtttcgtgtttaaacattgacgcgttat 12700
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6497
Number of Sequences: 1807
Number of extensions: 6497
Number of successful extensions: 234
Number of sequences better than 1.0e-20: 1
length of query: 839
length of database: 10,358,551
effective HSP length: 16
effective length of query: 823
effective length of database: 10,329,639
effective search space: 8501292897
effective search space used: 8501292897
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)